HR Excellence in Science

Current Trainings

 

Trainings 2022

Training name

  

The Date

Linux Command Line – mandatory part of Introduction to Bioinformatics

 

31.3.

Introduction to Bioinformatics

 

7.4. – 8.4.

demo BD FACSymphony A1

 

april

program R

 

9.5.

Academic writing

 

13.5.

Academic career

 

27.5.

program R

 

12.9

Leadership

 

september

Intercultural communication

 

september

Work-life balance

 

october

 

Description of trainings:

Linux Command Line

Mandatory part of the Introduction to Bioinformatics training.

Learning, how to work with command line

Lecturer: Dr. Abdoallah Sharaf

 

Introducton to Bioinformatics

· Quick introduction to NGS data and NGS data formats

· Standard commands in the Terminal to process NGS data – brief overview

· Visualization of the quality of raw NGS data

· Pre-processing of short-reads FASTA/FASTQ files using various programs

· Read mapping to the reference sequence

· Visualization and evaluation of mapping quality

· Identification and removal of duplicate reads

· Identification of unmapped reads – Blast

Lecturers from the SEQme company

 

Program R

· introduction to R & RStudio

· basic statistical approach overview: parametric and non-parametric statistical methods, outliers, testing of hypotheses

· two-sample tests

· ANOVA

· linear regression

· contingency tables

· survival analysis

· K – means clustering

· Spearman correlation coefficient

Lecturer: RNDr. Václav Čapek, Ph.D.

 

Akademic writing

· write about your own research

· learn to analyze and critique texts written by others

· produce texts that you need (e.g. an abstract, introduction, discussion/conclusion)

· receive in-depth feedback on the structure, logic, and language of your texts

Lecturer: Mgr. Kamila Etchegoyen Rosolová, Ph.D.

 

Akademic career

· Reflection on the formal and informal demands of a scientific career

· Key aspects of the evaluation of scientists, what to look for

· Current systems for evaluating scientific performance

· Strategic career planning

· Model dilemmas associated with starting a scientific career

Lecturer: Mgr. Kateřina Cidlinská, Ph.D. a Mgr. Kateřina Machovcová, Ph.D.

 

More information for the Leadership training, Intercultural communication and Work-life balance will be published after the selection of the supplier.

 

CONTACT

Biology Centre CAS
Branišovská 1160/31
370 05 České Budějovice
Data box: r84nds8

 

+420 387 775 111 (switchboard)
+420 387 775 051 (secretariat)
+420 778 468 552 (for media)

Staff search

Biologické centrum Google mapa

Login to the intranet

To log into the intranet enter your login details

×