| Total found: 38 records |
Henriques Vieira H., Bulzu P., Kasalický V., Haber M., Znachor P., Piwosz K., Ghai R. (2024) Isolation of a widespread giant virus implicated in cryptophyte bloom collapse. The ISME Journal
18: wrae029.
DOI: 10.1093/ismejo/wrae029
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Layoun P., López-Pérez M., Haro-Moreno J.M., Haber M., Thrash J.C., Henson M.W., Kavagutti V., Ghai R., Salcher M. (2024) Flexible genomic island conservation across freshwater and marine Methylophilaceae. The ISME Journal
18: wrad036.
DOI: 10.1093/ismejo/wrad036
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Kavagutti V., Bulzu P., Chiriac M., Salcher M., Mukherjee I., Shabarova T., Grujčić V., Mehrshad M., Kasalický V., Andrei A.S., Jezberová J., Seďa J., Rychtecký P., Znachor P., Šimek K., Ghai R. (2023) High‑resolution metagenomic reconstruction of the freshwater spring bloom. Microbiome
11: 15.
DOI: 10.1186/s40168-022-01451-4
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Kavagutti V., Chiriac M., Ghai R., Salcher M., Haber M. (2023) Isolation of phages infecting the abundant freshwater Actinobacteriota order ‘Ca. Nanopelagicales’. The ISME Journal
17: 943–946.
DOI: 10.1038/s41396-023-01400-5
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Ngugi D.K., Salcher M., Andrei A.S., Ghai R., Klotz F., Chiriac M., Ionescu D., Büsing P., Grossart H., Xing P., Priscu J.C., Alymkulov S., Pester M. (2023) Postglacial adaptations enabled colonization and quasi-clonal dispersal of ammonia-oxidizing archaea in modern European large lakes. Sciences Advances
9: eadc9392.
DOI: 10.1126/sciadv.adc9392
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Šimek K., Mukherjee I., Szöke-Nagy T., Haber M., Salcher M., Ghai R. (2023) Cryptic and ubiquitous aplastidic cryptophytes are key freshwater flagellated bacterivores. ISME Journal
17: 84–94.
DOI: 10.1038/s41396-022-01326-4
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Bulzu P., Kavagutti V., Andrei A.S., Ghai R. (2022) The evolutionary kaleidoscope of rhodopsins. mSystems
7: e00405-22.
DOI: 10.1128/msystems.00405-22
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Chiriac M., Bulzu P., Andrei A.S., Okazaki Y., Nakano S., Haber M., Kavagutti V., Layoun P., Ghai R., Salcher M. (2022) Ecogenomics sheds light on diverse lifestyle strategies in freshwater CPR. Microbiome
10: 84.
DOI: 10.1186/s40168-022-01274-3
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Bulzu P., Kavagutti V., Chiriac M., Vavourakis C.D. , Inoue K. , Kandori H. , Andrei A.S., Ghai R. (2021) Heliorhodopsin evolution is driven by photosensory promiscuity in monoderms. mSphere
6: e00661-21.
DOI: 10.1128/mSphere.00661-21
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Durán-Viseras A., Andrei A., Vera-Gargallo B., Ghai R., Sánchez-Porro C., Ventosa A. (2021) Culturomics-based genomics sheds light on the ecology of the new haloarchaeal genus Halosegnis. Environmental Microbiology
23: 3418–3434.
DOI: 10.1111/1462-2920.15082
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Mujakic I., Andrei A., Shabarova T., Kolesár Fecskeová L., Salcher M., Piwosz K., Ghai R., Koblížek M. (2021) Common presence of phototrophic Gemmatimonadota in temperate freshwater lakes. mSystems
6: e01241-20.
DOI: 10.1128/mSystems.01241-20
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Saha S., Bulzu P., Urajová P., Mareš J., Konert G., Manoel J.C., Macho M. , Ewe D., Hrouzek P., Masojídek J., Ghai R., Sourav K. (2021) Quorum-sensing signals from epibiont mediate the induction of novel microviridins in the mat-forming cyanobacterial genus Nostoc. mSphere
6: e00562-21.
DOI: 10.1128/mSphere.00562-21
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Cabello-Yeves P.J., Zemskaya T.I., Zakharenko A.S., Sakirko M.V., Ivanov V.G., Ghai R., Rodriguez-Valera F. (2020) Microbiome of the deep Lake Baikal, a unique oxic bathypelagic habitat Limnology and Oceanography
65: 1471–1488.
DOI: doi.org/10.1002/lno.11401
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Inoue K. , Tsunoda S.P., Singh M., Tomida S., Hososhima S., Konno M., Nakamura R., Watanabe H. , Bulzu P.A., Banciu H.L., Andrei A., Uchihashi T., Ghai R., Béjà O., Kandori H. (2020) Schizorhodopsins: A family of rhodopsins from Asgard archaea that function as light-driven inward H+ pumps Science Advances
6: eaaz2441.
DOI: 10.1126/sciadv.aaz2441
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Mukherjee I., Salcher M., Andrei A., Kavagutti V., Shabarova T., Grujčić V., Haber M., Layoun P., Hodoki Y., Nakano S., Šimek K., Ghai R. (2020) A freshwater radiation of diplonemids Environmental Microbiology
22: 4658–4668.
DOI: doi.org/10.1101/2020.05.14.095992
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Park S.J., Andrei A., Bulzu P., Kavagutti V., Ghai R., Mosier A.C. (2020) Expanded diversity and metabolic versatility of marine nitrite-oxidizing bacteria revealed by cultivation-and genomics-based approaches. Applied and Environmental Microbiology
86: e01667-20.
DOI: doi.org/10.1128/AEM.01667-20
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Salcher M., Andrei A., Bulzu P., Keresztes Z.G., Banciu H.L., Ghai R. (2020) Visualization of Lokiarchaeia and Heimdallarchaeia (Asgardarchaeota) by fluorescence in situ hybridization and catalyzed reporter deposition (CARD-FISH) mSphere
5: e00686-20.
DOI: doi.org/10.1128/mSphere.00686-20
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Andrei A., Salcher M., Mehrshad M., Rychtecký P., Znachor P., Ghai R. (2019) Niche-directed evolution modulates genome architecture in freshwater Planctomycetes ISME Journal
13: 1056–1071.
DOI: 10.1038/s41396-018-0332-5
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Bulzu P.A., Andrei A., Salcher M., Mehrshad M., Inoue K. , Kandori H. , Béjà O., Ghai R., Banciu H.L. (2019) Casting light on Asgardarchaeota metabolism in a sunlit microoxic niche Nature Microbiology
4: 1129–1137 .
DOI: 10.1038/s41564-019-0404-y
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Durán-Viseras A., Andrei A., Ghai R., Sánchez-Porro C., Ventosa A. (2019) New Halonotius Species Provide Genomics-Based Insights Into Cobalamin Synthesis in Haloarchaea Frontiers in Microbiology
10: 1928.
DOI: 10.3389/fmicb.2019.01928
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