Prokopchuk G.,
Korytář T.,
Juricová V., Majstorović J., Horák A., Šimek K.,
Lukeš J. (2022) Trophic flexibility of marine diplonemids - switching from osmotrophy to bacterivory The ISME Journal
16: 1409–1419.
DOI: 10.1038/s41396-022-01192-0
Documents to download:
Prokopchuk_2022_ISMEJ (pdf)
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Tashyreva D., Simpson A.,
Prokopchuk G.,
Škodová-Sveráková I.,
Butenko A.,
Hammond M., George E.E.,
Flegontova O.,
Záhonová K.,
Faktorová D., Yabuki A., Horák A., Keeling P.,
Lukeš J. (2022) Diplonemids - A Review on "New" Flagellates on the Oceanic Block Protist
173: 125868.
DOI: 10.1016/j.protis.2022.125868
Documents to download:
Tashyreva_2022_Protist (pdf)
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Barcytė D., Eikrem W., Engesmo A., Seoane S., Wohlmann J., Horák A., Yurchenko T., Eliáš M. (2021) Olisthodiscus represents a new class of Ochrophyta Journal of Phycology
57: 1094–1118.
DOI: 10.1111/jpy.13155
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Škodová-Sveráková I.,
Záhonová K.,
Juricová V., Danchenko M.,
Moos M., Baráth P.,
Prokopchuk G.,
Butenko A., Lukáčová V., Kohútová L., Bučková B., Horák A.,
Faktorová D., Horváth A.,
Šimek P.,
Lukeš J. (2021) Highly flexible metabolism of the marine euglenozoan protist /Diplonema papillatum/. BMC Biology
19: 251.
DOI: 10.1186/s12915-021-01186-y
Documents to download:
Skodova-Sverakova_2021_BMCBiol (pdf)
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Turnšek J., Brunson J.K., Viedma M.D.P.M., Deerinck T.J., Horák A.,
Oborník M., Bielinski V.A., Allen A.E. (2021) Proximity proteomics in a marine diatom reveals a putative cell surface-to-chloroplast iron trafficking pathway eLife
10: e52770.
DOI: 10.7554/eLife.52770
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Butenko A., Opperdoes F.R.,
Flegontova O., Horák A., Hampl V., Keeling P., Gawryluk R., Tikhonenkov D.V.,
Flegontov P.,
Lukeš J. (2020) Evolution of metabolic capabilities and molecular features of diplonemids, kinetoplastids, and euglenids BMC biology
18: 23.
DOI: 10.1186/s12915-020-0754-1
Documents to download:
Butenko_BMC-Biology_2020 (pdf)
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Flegontova O.,
Flegontov P.,
Castaňeda Londoňo P., Walczowski W., Śantić D., Edgcomb V.,
Lukeš J., Horák A. (2020) Environmental determinants of the distribution of planktonic diplonemids and kinetoplastids in the oceans Environmental Microbiology
22: 4014–4031.
DOI: 10.1111/1462-2920.15190
Documents to download:
Flegontova_2020_EnvMicrob (pdf)
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George E.E., Husník F.,
Tashyreva D.,
Prokopchuk G., Horák A., Kwong W.K.,
Lukeš J., Keeling P. (2020) Highly Reduced Genomes of Protist Endosymbionts Show Evolutionary Convergence Current Biology
30: 925-933.
DOI: 10.1016/j.cub.2019.12.070
Documents to download:
George_2020_CurrentBiology (pdf)
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Horák A., Allen A.E.,
Oborník M. (2020) Common origin of ornithine–urea cycle in opisthokonts and stramenopiles Scientific Reports
10: 16687.
DOI: 10.1038/s41598-020-73715-8
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Kolísko M.,
Flegontova O., Karnkowska A., Lax G., Maritz J.M., Pánek T.,
Táborský P., Carlton J.M., Čepička I., Horák A.,
Lukeš J., Simpson A., Tai V. (2020) EukRef-excavates: seven curated SSU ribosomal RNA gene databases Database
2020: baaa080.
DOI: 10.1093/database/baaa080
Documents to download:
Kolisko_2020_Database (pdf)
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Smýkal V.,
Pivarči M.,
Provazník J.,
Bazalová O., Jedlička P., Lukšan O., Horák A.,
Vaněčková H., Beneš V.,
Fiala I., Hanus R.,
Doležel D. (2020) Complex evolution of insect insulin receptors and homologous decoy receptors, and functional significance of their multiplicity. Molecular Biology and Evolution
37: 1775-1789.
DOI: 10.1093/molbev/msaa048
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Coale T.H., Moosburner M., Horák A.,
Oborník M., Barbeau K.A., Allen A.E. (2019) Reduction-dependent siderophore assimilation in a model pennate diatom Proceedings of the National Academy of Sciences of United States of America
116: 23609-23617.
DOI: 10.1073/pnas.1907234116
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Prokopchuk G.,
Tashyreva D., Yabuki A., Horák A.,
Masařová P.,
Lukeš J. (2019) Morphological, ultrastructural, motility and evolutionary characterization of two new Hemistasiidae species Protist
170: 259–282.
DOI: 10.1016/j.protis.2019.04.001
Documents to download:
Prokopchuk et al._2019_Protist (pdf)
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Smith S.R., Dupont C.L., McCarthy J.K., Boddrick J.T.,
Oborník M., Horák A.,
Füssy Z.,
Cihlář J., Kleessen S., Zheng H., McCrow J.P., Hixson K.K., Araújo W.L., Nunes-Nesi A., Fernie A., Nikoloski Z., Palsson B.O., Allen A.E. (2019) Evolution and regulation of nitrogen flux through compartmentalized metabolic networks in a marine diatom Nature Communications
10: 4552.
DOI: 10.1038/s41467-019-12407-y
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Faktorová D., Bär A.,
Hashimi H., McKenney K., Horák A., Schnaufer A., Rubio M., Alfonzo J.,
Lukeš J. (2018) TbUTP10, a protein involved in early stages of pre-18S rRNA processing in Trypanosoma brucei Molecular and Biochemical Parasitology
225: 84–93.
DOI: 10.1016/j.molbiopara.2018.09.003
Documents to download:
Faktorova_et al._2018 (pdf)
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Flegontova O.,
Flegontov P., Malviya S., Poulain J., de Vargas C., Bowler C.,
Lukeš J., Horák A. (2018) Neobodonids are dominant kinetoplastids in the global ocean Environmental Microbiology
20: 878-889.
DOI: 10.1111/1462-2920.14034
Documents to download:
Flegontova_et.al_2018 (pdf)
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McQuaid J.B., Kustka A.B.,
Oborník M., Horák A., Mccrow J., Karas B.J., Zheng H., Kindeberg T., Andersson A.J., Barbeau K.A., Allen A. (2018) Carbonate-sensitive phytotransferrin controls high-affinity iron uptake in diatoms Nature
555: 534-537.
DOI: 10.1038/nature25982
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Tashyreva D.,
Prokopchuk G.,
Votýpka J., Yabuki A., Horák A.,
Lukeš J. (2018) Life cycle, ultrastructure, and phylogeny of new diplonemids and their endosymbiotic bacteria mBio
9: e02447-17.
DOI: 10.1128/mBio.02447-17
Documents to download:
Tashyreva et al. 2018 mBio (pdf)
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Tashyreva D.,
Prokopchuk G., Yabuki A.,
Kaur B.,
Faktorová D.,
Votýpka J., Kusaka Ch., Fujikura K. , Shiratori T., Ishida K., Horák A.,
Lukeš J. (2018) Phylogeny and morphology of new diplonemids from Japan Protist
169: 158–179.
DOI: 10.1016/j.protis.2018.02.001
Documents to download:
Tashyreva_et.al_Protist_2018 (pdf)
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Rueckert S., Horák A. (2017) Archigregarines of the English Channel revisited: new molecular data on Selenidium species including early described and new species and the uncertainties of phylogenetic relationships Plos ONE
12: e0187430.
DOI: 10.1371/journal.pone.0187430
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