prof. RNDr. Julius Lukeš, CSc.
Head of Laboratory - Laboratory of Molecular Biology of Protists
Molecular Parasitology
Institute of Parasitology
+420 387775416
www.paru.cas.cz
jula@paru.cas.cz
PARU II
Professional Experience: 1991–present Research Scientist, Institute of Parasitology, České Budějovice 1992–2012 Member of the Scientific Board of the Institute of Parasitology 1993 Postdoctoral Fellow, E.C.Slater Institute, University of Amsterdam, The Netherlands 1995–2022 Head of the Laboratory of Molecular Parasitology, Institute of Parasitology 1994–1997 Assistant, Faculty of Biology, University of South Bohemia, České Budějovice 1997–1998 Postdoctoral Fellow, Department of Biology, University of California, Riverside 1998–1999 Visiting Scientist, Molecular Biology Institute, University of California, Los Angeles 2003–2012 Chair of the Department of Molecular Biology, University of South Bohemia 2006–present Professor, Faculty of Sciences, University of South Bohemia 2007–2012 Member of the Scientific Board of the Faculty of Sciences 2008–2013 Member of the Scientific Board of the Faculty of Agriculture 2008–2012 Head of the Scientific Board of the Institute of Parasitology 2012–2022 Director of the Institute of Parasitology 2012–2018 Committee member of the International Society of Protistologists 2021–present Vice–head of the principal Scientific Board of the Czech Academy of Sciences Honors and Awards: 1993 EMBO Fellowship 1995 Fulbright Travel Grant 1997 Young Scientist Award of the President of the Czech Academy of Sciences 2000–2005 European Councillor of the International Society for Evolutionary Protistology 2006–2008 President of the International Society for Evolutionary Protistology 2002 Prize of the Czech Academy of Sciences for outstanding young researchers 2003–2009 President of the Czech Society of Protozoology 2004–present Member of the Learned Society of the Czech Republic 2007 Prize of the Czech Academy of Sciences 2007–2009 Vice–president of the International Society of Protistologists 2009–2011 Associate of the Canadian Institute for Advanced Research 2011 Prize of the Minister of Education for Excellence in Research 2012–2017 Senior Fellow of the Canadian Institute for Advanced Research 2013–present Member of the Faculty of 1000 2013 Medal from the mayor for merits in research and education 2014–present Fellow of the American Academy for Microbiology 2015–present Fellow of the European Academy of Microbiology 2016–present Member of the Comenius Academic Club 2018–present Fellow of the American Association for the Advancement of Science (AAAS) 2020 Prize of the President of the Czech Academy of Sciences for research excellence 2020–present Member of the scientific board of the Neuron Endowment Fund 2023–present Member of the American Society for Biochemistry and Molecular Biology 2023–present EMBO member 2023 J. G. Mendel medal for Achievements in Natural Sciences 2023 Prize of the Minister of Education for Excellence in Research 2024–present Member of the U.S. National Academy of Sciences 2025–2026 President elect of the International Society of Protistologists Invited Lectures: Editorial Board: 2004–2006 Protistology 2005–2011 Journal of Eukaryotic Microbiology 2004–2008 Kinetoplastid Biology and Diseases 2009–present The Open Parasitology Journal 2010–2012 International Journal for Parasitology 2011–2012 Folia Parasitologica (Associate Editor) 2015– PeerJ 2017– Protist (Associate Editor) 2018– PLoS Pathogens (ad hoc Associate Editor) 2019– Frontiers in Cellular and Infection Microbiology (Associate Editor) 2020– mLife 2024– PLoS Pathogens Pearls (Editor) Principal organizer of conferences
Biochemistry and Molecular Biology of Parasites
Faculty of Science University of South Bohemia
Biology of Parasitic Protozoa
Faculty of Science, University of South Bohemia
Principles of Molecular Biology
Faculty of Science University of South Bohemia
|
Total found: 433 records
|
|---|
|
Faktorová D., Valach M.,
Iorillo O., Akiyoshi B., Burger G., Lukeš J. (2026) Genetic Manipulation of Paradiplonema papillatum. In: P.A. Michels, M.L. Ginger, A. Karnkowska, L.I. McCall, A.M. Silber (Eds), Euglenozoa, Methods in Molecular Biology. Humana, New York
3014: 3–25.
DOI: 10.1007/978-1-0716-5146-9_1 Documents to download: chapter_Faktorova_2026_Eughlenozoa_MetProt (pdf) |
|
Kostygov A. , Grybchuk D., Klocek D.,
Votýpka J., Mendoza-Roldan J.A., Lukeš J., Yurchenko V. (2026) The first RNA viruses detectedin a trypanosome. BMC Biology
24: 27.
DOI: 10.1186/s12915-025-02497-0 |
|
Prokopchuk G., Tashyreva D.,
Iorillo O., Akiyoshi B., Valach M., Lukeš J.,
Faktorová D. (2026) Preparation of Diplonemid Samples for Microscopy. In: P.A. Michels, M.L. Ginger, A. Karnkowska, L.I. McCall, A.M. Silber (Eds), Euglenozoa, Methods in Molecular Biology. Humana, New York, pp.
3013: 41–56.
DOI: 10.1007/978-1-0716-5142-1_3 Documents to download: chapter_Prokopchuk_2026_Eughlenozoa_MetProt (pdf) |
|
Tashyreva D.,
Prokopchuk G.,
Iorillo O., Valach M.,
Škodová-Sveráková I., Shin D.-W., Letts J.A., Burger G., Lukeš J.,
Faktorová D. (2026) Isolation and Cultivation of Diplonemids. In: P.A. Michels, M.L. Ginger, A. Karnkowska, L.I. McCall, A.M. Silber (Eds), Euglenozoa, Methods in Molecular Biology. Humana, New York, pp.
3013: 25–40.
DOI: 10.1007/978-1-0716-5142-1_2 Documents to download: chapter_Tashyreva_2026_Eughlenozoa_MetProt (pdf) |
|
Valach M., Burger G.,
Faktorová D., Lukeš J.,
Škodová-Sveráková I. (2026) Biochemistry of Diplonemids. In: P.A. Michels, M.L. Ginger, A. Karnkowska, L.I. McCall, A.M. Silber (Eds), Euglenozoa, Methods in Molecular Biology. Humana, New York, pp.
3014: 225–248.
DOI: 10.1007/978-1-0716-5146-9_15 Documents to download: chapter_Valach_2026_Eughlenozoa_MetProt (pdf) |
|
Akiyoshi B.,
Faktorová D., Lukeš J. (2025) Discovery of unique mitotic mechanisms in Paradiplonema papillatum. Open Biology
15: 250096.
DOI: 10.1098/rsob.250096 Documents to download: Akiyoshi_2025_OpenBiol (pdf) |
|
Čapková Pavlíková Z., Roithová A., Pospíšilová K.,
Záhonová K.,
Kachale A., Becker T.,
Durante I., Lukeš J.,
Paris Z., Beznosková P., Valášek L.S. (2025) Ribosomal A-site interactions with near-cognate tRNAs drive stop codon readthrough. Nature Structural and Molecular Biology
32: 662–674.
DOI: 10.1038/s41594-024-01450-z Documents to download: Capkova_2025_NatStrMolBiol (pdf) |
|
Galan A., Kraeva N.,
Záhonová K.,
Butenko A., Kostygov A.,
Paris Z., Pergner J., Claretta B., Fakih F., Saura A., Lukeš J., Yurchenko V. (2025) Converting Blastocrithidia nonstop, a trypanosomatid with non-canonical genetic code, into a genetically-tractable model. Molecular Microbiology
122: 586-592.
DOI: 10.1111/mmi.15365 Documents to download: Galan_2025_MolMicrob (pdf) |
|
Gerasimov E.S., Afonin D.A.,
Škodová-Sveráková I., Saura A., Trusina N.,
Gahura O., Zakharova A.,
Butenko A., Baráth P., Horváth A., Opperdoes F.R., Pérez-Morgai D., Zimmer S., Lukeš J., Yurchenko V. (2025) Evolutionary divergent kinetoplast genome structure and RNA editing patterns in the trypanosomatid Vickermania. Proceedings of the National Academy of Sciences of the United States of America
122: e2426887122.
DOI: 10.1073/pnas.2426887122 Documents to download: Gerasimov_2025_PNAS (pdf) |
|
Gray M., Valach M., Sarrasin M., Le Sieur F.-A., Lukeš J., Burger G. (2025) The mitochondrial proteome of diplonemids: from conventional pathways to eccentric RNA editing and transcript processing. BMC Genomics
26: 1099.
DOI: 10.1186/s12864-025-12233-1 Documents to download: Gray_2025_BMCGenomics (pdf) |
|
Hammond M.,
Iorillo O.,
Faktorová D.,
Svobodová M., Akiyoshi B., Licknack T., Poh Y.P., Lukeš J., Wideman J.G. (2025) Subcellular proteomics of the protist Paradiplonema papillatum reveals the digestive capacity of the cell membrane and the plasticity of peroxisomes across euglenozoans. PloS Biology
23: e3003319.
DOI: 10.1371/journal.pbio.3003319 Documents to download: Hammond_2025_PlosBiol (pdf) |
|
Lukeš J., Čapková Pavlíková Z., Yurchenko V.,
Paris Z., Valášek L.S. (2025) Blastocrithidia—A Genetic Alien from the Planet Earth Cold Spring Harbor Perspectives in Biology
17: a041868.
DOI: 10.1101/cshperspect.a041868 Documents to download: Lukes_2025_CSHPiB (pdf) |
|
Lukeš J., Eliáš M.,
Kachale A., van der Gulik P.T.S., Speijer D. (2025) Natural and artificial variations of the standard genetic code. Current Biology
35: R1104–R1126.
DOI: 10.1016/j.cub.2025.09.071 Documents to download: Lukes_2025_CurrBiol (pdf) |
|
Pendlebury M., Lukeš J.,
Hammond M. (2025) You can go your own way: The targeting signals of trypanosomatid parasites. PloS Pathogens
21: e1013326.
DOI: 10.1371/journal.ppat.1013326 Documents to download: Pendlebury_2025_PlosPathogens (pdf) |
|
Schoenle A., Francis O., Archibald J., Burki F., de Vries J., Dumack K., Eme L., Florent I.,
Hehenberger E., Hoffmeyer T.T., Irisarri I., Lara E., Leger M.M., Lukeš J., Massana R., Mathur V., Nitsche F. , Strassert J., Worden A., Yurchenko V., del Campo J., Waldvogel A.M. (2025) Protist genomics: key to understanding eukaryotic evolution. Trends in Genetics
41: 868-882.
DOI: 10.1016/j.tig.2025.05.004 Documents to download: Schoenle_2025_TrendsGenetics (pdf) |
|
Świrski M.I., Tierney J.A.S., Albà M.M., Andreev D.E., Aspden J.L., Atkins J.F., Bassani-Sternberg M., Berry M.J., Biffo S., Boris-Lawrie K., Borodovsky M., Brierley I., Brook M., Lukeš J., Yurchenko V., Zagrovic B., Valen E., Baranov P.V. (2025) Translon: a single term for translated regions. Nature Methods
22: 2002–2006.
DOI: 10.1038/s41592-025-02810-3 Documents to download: Swirski_2025_NatMet (pdf) |
|
Tashyreva D.,
Votýpka J., Yabuki A.,
Horák A., Lukeš J. (2025) Description of new diplonemids (Diplonemea, Euglenozoa) and their endosymbionts: Charting the morphological diversity of these poorly known heterotrophic flagellates Protist
177: 126090.
DOI: 10.1016/j.protis.2025.126090 Documents to download: Tashyreva_2025_Protist (pdf) |
|
Thakur P.K.,
Butenko A., Karásek F.,
Svobodová M.,
Faktorová D., Pavlisková H., Varga V.,
Horák A., Lukeš J., Staněk D. (2025) Splice site diversity and abundance of non-canonical introns in diplonemids (Diplonemea, Euglenozoa). RNA
31: 1826–1840.
DOI: 10.1261/rna.080641.125 Documents to download: Thakur_2025_RNA (pdf) |
|
Votýpka J., Bulantová J., Lukeš J. (2025) Pthirus pubis (pubic louse) Trends in Parasitology
41: 1062–1063.
DOI: 10.1016/j.pt.2025.05.012 Documents to download: Votypka_2025_TrendsParasitol (pdf) |
|
Votýpka J.,
Jirků M., Spodareva V., Režnarová J., Poloprutská K., Pajer P., Milner D., Richards T., Yurchenko V., Ibáñez R., Lukeš J., Kostygov A. (2025) Trypanosomes in Neotropical frogs: unveiling hidden megadiversity and complex host-parasite patterns. Open Biology
15: 250190.
DOI: 10.1098/rsob.250190 Documents to download: Votypka_2025_OpenBiol (pdf) |


